Basic Information
Locus ID:
nbis-gene-34926
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00049.1 | 1056308 | 1058249 | - | nbis-gene-34926 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 34,456.44 Da | 57.14 | 63.68 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07035 | TPP_PYR_POX_like | 184 | 280 | 7.91811E-21 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 184 | 280 | 4.4E-17 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 185 | 280 | 7.85E-16 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 104 | 292 | 9.1E-19 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 33 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G17380.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_039809113.1 | 2-hydroxyacyl-CoA lyase [Panicum virgatum] | 0 |
| Q0JMH0 | 2-hydroxyacyl-CoA lyase OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0505400 PE=3 SV=3 | 0 | |
| TrEMBL | A0A3L6SQ80 | 2-hydroxyacyl-CoA lyase OS=Panicum miliaceum OX=4540 GN=C2845_PM07G39610 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology