Basic Information
Locus ID:
nbis-gene-34434
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00047.1 | 2087051 | 2090806 | - | nbis-gene-34434 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 41,898.32 Da | 34.92 | 78.72 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 141 | 293 | 1.2E-33 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 141 | 295 | 4.05E-44 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 125 | 220 | 1.6E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 221 | 298 | 4.5E-20 | - |
| SMART | SM00220 | serkin_6 | 141 | 371 | 1.4E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 141 | 375 | 26.930229 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 147 | 171 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 262 | 274 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 54 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00720.1 | shaggy-like protein kinase 32. Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway. | 0 |
| RefSeq | XP_002465046.1 | shaggy-related protein kinase alpha isoform X1 [Sorghum bicolor] | 0 |
| Q96287 | Shaggy-related protein kinase theta OS=Arabidopsis thaliana OX=3702 GN=ASK8 PE=2 SV=3 | 0 | |
| TrEMBL | C5WUM1 | non-specific serine/threonine protein kinase OS=Sorghum bicolor OX=4558 GN=SORBI_3001G321900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah016390, Ah033370 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg36297, Sbi_jg36299 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl01217 |
| Brassicaceae | Brassica nigra | 1 | BniB07g029680.2N |
| Poaceae | Oryza coarctata | 2 | Oco06G029160, Oco23G009390 |
| Poaceae | Thinopyrum elongatum | 4 | Tel2E01G1045700, Tel2E01G622000, Tel3E01G579800 ... |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1BG005820, gene_TRIDC7AG067580 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-34434 |