Basic Information
Locus ID:
nbis-gene-34432
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Ankyrin repeats (many copies)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00047.1 | 2078715 | 2084178 | - | nbis-gene-34432 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.05 | 20,201.68 Da | 71.48 | 65.75 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13637 | Ankyrin repeats (many copies) | 147 | 180 | 3.8E-8 | - |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 147 | 181 | 8.08E-11 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 104 | 185 | 1.1E-13 | IPR036770 |
| SMART | SM00248 | ANK_2a | 145 | 174 | 3.0E-6 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 145 | 176 | 13.787592 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 145 | 177 | 14.90635 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 73 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07270.1 | XB3 ortholog 3 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_024317561.1 | probable E3 ubiquitin-protein ligase XBOS33 isoform X2 [Brachypodium distachyon] | 0 |
| Q337A0 | Probable E3 ubiquitin-protein ligase XBOS33 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS33 PE=2 SV=1 | 0 | |
| TrEMBL | K4A700 | RING-type domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology