Basic Information
Locus ID:
nbis-gene-34308
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Domain of unknown function (DUF4283)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00047.1 | 1452692 | 1454271 | - | nbis-gene-34308 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 32,708.44 Da | 35.70 | 100.73 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 121 | 249 | 1.95851E-26 | - |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 134 | 232 | 1.1E-12 | IPR001650 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 69 | 257 | 6.12E-21 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 113 | 279 | 5.2E-29 | IPR027417 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 140 | 279 | 12.107317 | IPR001650 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 19 | 47 | 9.185743 | IPR014014 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.3 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_048551912.1 | eukaryotic initiation factor 4A-like [Triticum urartu] | 0 |
| Q0E2Q3 | Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0221300 PE=3 SV=2 | 0 | |
| TrEMBL | A0A5J9VAY9 | DUF4283 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_24901 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology