Basic Information
Locus ID:
nbis-gene-34198
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00047.1 | 900426 | 901398 | - | nbis-gene-34198 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 14,646.64 Da | 46.63 | 84.56 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039835336.1 | RING-H2 finger protein ATL40-like [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0XJI0 | RING-type domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1KG160554 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH07.1033, BH07.1155, CH02.245, CH02.272, CH07.931 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0107880, gene-QOZ80_2BG0161510 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0198510.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_022048, gene-QYE76_022049, gene-QYE76_022058 ... |
| Poaceae | Oryza coarctata | 2 | Oco03G006810, Oco04G007100 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g11480.1, LOC_Os02g15120.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G019900, gene-BS78_04G104800 |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G802700, Tel3E01G248100, Tel4E01G155100 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG067220, gene_TRIDC2BG072390 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2A02G475800.1.cds1, TraesCS2B02G499500.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb204420_P001, Zm00001eb238390_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-34198, nbis-gene-50891 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g12523, Zma_g15399 |