Basic Information
Locus ID:
nbis-gene-34125
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00047.1 | 526610 | 533459 | + | nbis-gene-34125 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 32,702.70 Da | 44.27 | 75.82 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 2 | 35 | 5.7E-9 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 110 | 256 | 9.7E-48 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 1 | 291 | 4.2E-47 | IPR011990 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 172 | 204 | 0.0012 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 169 | 203 | 9.602157 | IPR002885 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_008645498.1 | uncharacterized protein LOC103626926 isoform X4 [Zea mays] | 0 |
| TrEMBL | A0A5J9V977 | ribonuclease P OS=Eragrostis curvula OX=38414 GN=EJB05_24341 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology