HalophFGD

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Basic Information
Locus ID: nbis-gene-34074
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00047.1 253923 255125 + nbis-gene-34074
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.41 44,120.28 Da 54.25 92.83 0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 9 44 7.7E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 8 60 9.81E-11 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025807950.1 uncharacterized protein LOC112886277 [Panicum hallii] 0
TrEMBL A0A5J9VA74 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_24134 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH07.1321, AH07.1441, BH07.1366, BH07.1368, BH07.1405 ...
BH07.1412, CH07.1116
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_2AG0109700, gene-QOZ80_2AG0110130 ...
gene-QOZ80_2BG0163560, gene-QOZ80_2BG0163600, gene-QOZ80_2BG0163610
Poaceae Hordeum vulgare 8 HORVU.MOREX.r3.3HG0314030.1, HORVU.MOREX.r3.6HG0542260.1 ...
HORVU.MOREX.r3.4HG0387160.1.CDS1, HORVU.MOREX.r3.6HG0542100.1.CDS1, HORVU.MOREX.r3.6HG0553610.1, HORVU.MOREX.r3.6HG0555260.1, HORVU.MOREX.r3.7HG0726220.1, HORVU.MOREX.r3.7HG0740520.1.CDS1
Poaceae Lolium multiflorum 19 gene-QYE76_013410, gene-QYE76_019256, gene-QYE76_020131 ...
gene-QYE76_024738, gene-QYE76_026078, gene-QYE76_026079, gene-QYE76_026081, gene-QYE76_026292, gene-QYE76_026293, gene-QYE76_026294, gene-QYE76_026295, gene-QYE76_034976, gene-QYE76_035321, gene-QYE76_035751, gene-QYE76_036498, gene-QYE76_036499, gene-QYE76_059643, gene-QYE76_063286, gene-QYE76_068969
Poaceae Oryza coarctata 4 Oco03G007890, Oco04G008240, Oco04G008250, Oco04G008270
Poaceae Oryza sativa 2 LOC_Os02g18614.1, LOC_Os02g18720.1
Poaceae Paspalum vaginatum 4 gene-BS78_04G123700, gene-BS78_K094100, gene-BS78_K243000 ...
gene-BS78_K244100
Poaceae Puccinellia tenuiflora 24 Pt_Chr0200702, Pt_Chr0200703, Pt_Chr0200704, Pt_Chr0200706 ...
Pt_Chr0200831, Pt_Chr0203811, Pt_Chr0204699, Pt_Chr0204703, Pt_Chr0204715, Pt_Chr0204716, Pt_Chr0204724, Pt_Chr0204725, Pt_Chr0300307, Pt_Chr0306953, Pt_Chr0307077, Pt_Chr0401444, Pt_Chr0401446, Pt_Chr0404219, Pt_Chr0404221, Pt_Chr0503491, Pt_Chr0505179, Pt_Chr0505426, Pt_Chr0601041, Pt_Chr0704558
Poaceae Sporobolus alterniflorus 3 Chr06G031510, Chr09G000780, Chr15G022780
Poaceae Thinopyrum elongatum 22 Tel1E01G645700, Tel2E01G134600, Tel2E01G148100 ...
Tel3E01G188900, Tel3E01G681600, Tel3E01G723100, Tel3E01G752900, Tel4E01G635600, Tel5E01G568900, Tel6E01G039000, Tel6E01G043500, Tel6E01G044200, Tel6E01G045100, Tel6E01G048200, Tel6E01G071100, Tel6E01G122100, Tel6E01G158400, Tel6E01G167200, Tel6E01G215200, Tel6E01G226200, Tel7E01G465900, Tel7E01G848600
Poaceae Triticum dicoccoides 9 gene_TRIDC1AG057960, gene_TRIDC1BG017590 ...
gene_TRIDC1BG066740, gene_TRIDC3AG064480, gene_TRIDC3BG072760, gene_TRIDC6AG012980, gene_TRIDC6BG003780, gene_TRIDC6BG018120, gene_TRIDC6BG018180
Poaceae Triticum aestivum 62 TraesCS1A02G393700.1, TraesCS1B02G083300.1 ...
TraesCS1B02G423000.1, TraesCS1D02G065900.1, TraesCS1D02G402800.1, TraesCS2A02G058400.1, TraesCS2D02G057400.2, TraesCS3A02G109100.1, TraesCS3A02G428600.1.cds1, TraesCS3A02G456400.1, TraesCS3A02G456500.1, TraesCS3B02G128100.1, TraesCS3B02G466200.1.cds1, TraesCS3B02G496600.2, TraesCS3B02G496700.1, TraesCS3B02G496900.1.cds1, TraesCS3B02G497000.1, TraesCS3B02G497100.1, TraesCS3D02G110900.2, TraesCS3D02G449500.1, TraesCS3D02G449600.1, TraesCS3D02G449700.1.cds1, TraesCS3D02G449800.1, TraesCS4B02G391600.1, TraesCS4B02G392900.1, TraesCS5B02G357900.1, TraesCS5D02G363100.1, TraesCS5D02G363300.1, TraesCS5D02G497500.1, TraesCS6A02G010800.1, TraesCS6A02G023800.1.cds1, TraesCS6A02G023900.1, TraesCS6A02G047800.1, TraesCS6A02G100400.1, TraesCS6B02G017300.1, TraesCS6B02G019500.1.cds1, TraesCS6B02G032500.1, TraesCS6B02G032600.1, TraesCS6B02G032800.1, TraesCS6B02G095400.1, TraesCS6B02G095500.1, TraesCS6B02G120000.1, TraesCS6B02G120300.1, TraesCS6B02G128400.1, TraesCS6B02G128500.1, TraesCS6D02G023200.1, TraesCS6D02G027100.1, TraesCS6D02G027200.1, TraesCS6D02G027300.1, TraesCS6D02G027500.1, TraesCS6D02G044000.1, TraesCS6D02G055300.1, TraesCS6D02G069200.1, TraesCS6D02G080600.1, TraesCS6D02G080900.1, TraesCS7A02G496900.1, TraesCS7B02G400700.1.cds1, TraesCS7B02G481600.2, TraesCS7D02G483700.1, TraesCS7D02G484000.1, TraesCS7D02G484100.1.cds1, TraesCSU02G034900.1
Poaceae Zea mays 1 Zm00001eb236980_P001
Poaceae Zoysia japonica 3 nbis-gene-34074, nbis-gene-34088, nbis-gene-45205
Poaceae Zoysia macrostachya 3 Zma_g12614, Zma_g15308, Zma_g15320
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.