Basic Information
Locus ID:
nbis-gene-339
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
SnRK2.7
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00001.1 | 1495449 | 1507170 | - | nbis-gene-339 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.89 | 63,853.63 Da | 41.96 | 76.93 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 82 | 144 | 8.0E-10 | IPR000719 |
| Pfam | PF01092 | Ribosomal protein S6e | 317 | 444 | 2.7E-56 | IPR001377 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 73 | 209 | 2.66E-20 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 153 | 6.1E-26 | - |
| Gene3D | G3DSA:1.20.5.2650 | - | 449 | 550 | 2.0E-36 | - |
| SMART | SM00220 | serkin_6 | 82 | 187 | 3.8E-6 | IPR000719 |
| SMART | SM01405 | Ribosomal_S6e_2 | 317 | 444 | 9.5E-83 | IPR001377 |
| ProSitePatterns | PS00578 | Ribosomal protein S6e signature. | 368 | 379 | - | IPR018282 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 88 | 111 | - | IPR017441 |
| Hamap | MF_00512 | 30S ribosomal protein S6e [rps6e]. | 49 | 433 | 14.359169 | IPR020924 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 41 | - | - |
| Coils | Coil | Coil | 505 | 532 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko03010 (Ribosome)
map03010 (Ribosome)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10360.1 | Ribosomal protein S6e. RPS6A and RPS6B are fully redundant and essential during gametogenesis. | 0 |
| RefSeq | XP_040382268.1 | serine/threonine-protein kinase SAPK2 [Oryza brachyantha] | 0 |
| Q9M3V8 | Small ribosomal subunit protein eS6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1 | 0 | |
| TrEMBL | M8CRX1 | Serine/threonine-protein kinase SAPK2 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology