Basic Information
Locus ID:
nbis-gene-33849
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00046.1 | 159944 | 165193 | + | nbis-gene-33849 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 56,831.94 Da | 42.52 | 86.68 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 21 | 124 | 1.06367E-45 | - |
| Pfam | PF03000 | NPH3 family | 225 | 352 | 3.4E-44 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 28 | 117 | 4.3E-6 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 179 | 220 | 6.2E-9 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 117 | 1.02E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 119 | 5.2E-11 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 10.199271 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 220 | 376 | 46.59663 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 521 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37590.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_025793575.1 | BTB/POZ domain-containing protein NPY4-like [Panicum hallii] | 0 |
| Q0WL52 | Phototropic-responsive NPH3 family protein NPY5 OS=Arabidopsis thaliana OX=3702 GN=NPY5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2S3IK81 | NPH3 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G167400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology