Basic Information
Locus ID:
nbis-gene-33765
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
DEAD/DEAH box helicase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00045.1 | 1919622 | 1930140 | + | nbis-gene-33765 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 35,150.83 Da | 41.36 | 81.29 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF09382 | RQC domain | 34 | 114 | 1.3E-10 | IPR018982 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 34 | 78 | 1.77E-6 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 25 | 109 | 4.0E-11 | IPR036388 |
| SMART | SM00956 | RQC_2 | 13 | 111 | 0.002 | IPR018982 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 214 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10930.1 | DNA helicase (RECQl4A). DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. | 0 |
| RefSeq | XP_004951944.1 | ATP-dependent DNA helicase Q-like 4A [Setaria italica] | 0 |
| Q8L840 | ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6RSJ5 | DNA helicase OS=Panicum miliaceum OX=4540 GN=C2845_PM11G14120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology