HalophFGD

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Basic Information
Locus ID: nbis-gene-33751
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00045.1 1864787 1867677 - nbis-gene-33751
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.27 58,202.18 Da 50.87 72.02 -0.64
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00756 MoaE 40 130 2.2479E-39 IPR003448
Pfam PF02391 MoaE protein 38 113 5.1E-25 IPR003448
SUPERFAMILY SSF54690 Molybdopterin synthase subunit MoaE 38 135 5.75E-33 IPR036563
Gene3D G3DSA:3.90.1170.40 Molybdopterin biosynthesis MoaE subunit 29 141 1.8E-36 IPR036563
MobiDBLite mobidb-lite consensus disorder prediction 226 268 - -
Gene Ontology
Biological Process:
GO:0006777 (Mo-molybdopterin cofactor biosynthetic process)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G16770.1 0
RefSeq XP_034576951.1 uncharacterized protein LOC117840545 [Setaria viridis] 0
Swiss-Prot A2X0R4 Molybdopterin synthase catalytic subunit OS=Oryza sativa subsp. indica OX=39946 GN=MOCS2 PE=3 SV=1 0
TrEMBL A0A3L6TT77 Uncharacterized protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G17030 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_5501
Amaranthaceae Atriplex hortensis 1 Ah028579
Amaranthaceae Salicornia bigelovii 3 Sbi_jg26779, Sbi_jg26780, Sbi_jg33787
Amaranthaceae Salicornia europaea 1 Seu_jg8479
Amaranthaceae Suaeda aralocaspica 1 GOSA_00011717
Amaranthaceae Suaeda glauca 2 Sgl73636, Sgl77100
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000007632, gene:ENSEOMG00000034489 ...
gene:ENSEOMG00000038147
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.7AG0007860, CQ.Regalona.r1.9BG0008150
Anacardiaceae Pistacia vera 2 pistato.v30028380, pistato.v30132220
Apiaceae Apium graveolens 2 Ag11G03959, Ag3G02673
Arecaceae Cocos nucifera 1 COCNU_02G019770
Arecaceae Phoenix dactylifera 1 gene-LOC103713130
Asparagaceae Asparagus officinalis 1 AsparagusV1_01.3547.V1.1
Asteraceae Flaveria trinervia 1 Ftri1G34104
Brassicaceae Arabidopsis thaliana 1 AT1G16770.1
Brassicaceae Eutrema salsugineum 1 Thhalv10009697m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp1g14920.v2.2
Brassicaceae Brassica nigra 1 BniB03g006770.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq02G1060
Casuarinaceae Casuarina glauca 1 Cgl02G1102
Dunaliellaceae Dunaliella salina 2 Dusal.0064s00016.v1.0, Dusal.0064s00017.v1.0
Nitrariaceae Nitraria sibirica 1 evm.TU.LG01.619
Plantaginaceae Plantago ovata 1 Pov_00019873
Plumbaginaceae Limonium bicolor 1 Lb2G15469
Poaceae Echinochloa crus-galli 4 AH01.3419, BH01.3772, BH07.4227, CH01.4022
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_2AG0101380, gene-QOZ80_2BG0154720
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.6HG0557570.1
Poaceae Oryza coarctata 2 Oco03G002240, Oco04G002170
Poaceae Oryza sativa 1 LOC_Os02g04780.1
Poaceae Paspalum vaginatum 1 gene-BS78_08G150900
Poaceae Puccinellia tenuiflora 1 Pt_Chr0207623
Poaceae Thinopyrum elongatum 1 Tel6E01G245600
Poaceae Triticum dicoccoides 2 gene_TRIDC6AG014660, gene_TRIDC6BG020030
Poaceae Triticum aestivum 3 TraesCS6A02G111700.1, TraesCS6B02G139800.1 ...
TraesCS6D02G100500.2
Poaceae Zea mays 1 Zm00001eb328020_P001
Poaceae Zoysia japonica 1 nbis-gene-33751
Poaceae Zoysia macrostachya 1 Zma_g12181
Portulacaceae Portulaca oleracea 2 evm.TU.LG03.1224, evm.TU.LG12.562
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-10255
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-13119
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-17767
Rhizophoraceae Kandelia candel 1 evm.TU.utg000018l.924
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-3085
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-11479
Solanaceae Lycium barbarum 1 gene-LOC132632699
Solanaceae Solanum chilense 1 SOLCI001789200
Solanaceae Solanum pennellii 1 gene-LOC107013812
Tamaricaceae Reaumuria soongarica 1 gene_4393
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.