Basic Information
Locus ID:
nbis-gene-33313
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00044.1 | 2194011 | 2197711 | + | nbis-gene-33313 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 60,594.28 Da | 38.56 | 92.34 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 230 | 390 | 1.42514E-93 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 226 | 396 | 7.7E-37 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 428 | 543 | 1.6E-10 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 428 | 568 | 6.79E-27 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 226 | 399 | 4.32E-46 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 421 | 555 | 1.9E-36 | - |
| Gene3D | G3DSA:1.20.5.340 | - | 31 | 113 | 6.8E-15 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 223 | 399 | 2.5E-62 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_048560390.1 | pyruvate decarboxylase 2-like [Triticum urartu] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5URB6 | pyruvate decarboxylase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0023626 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology