Basic Information
Locus ID:
nbis-gene-33230
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
60S ribosomal protein L18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00044.1 | 1818428 | 1821098 | + | nbis-gene-33230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.42 | 23,625.73 Da | 43.74 | 93.85 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 28 | 212 | 5.3E-95 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 46 | 165 | 1.83E-26 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 27 | 213 | 1.3E-99 | - |
| ProSitePatterns | PS01106 | Ribosomal protein L18e signature. | 76 | 93 | - | IPR021132 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 213 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27850.1 | Ribosomal protein L18e/L15 superfamily protein. | 0 |
| RefSeq | NP_001131538.1 | 60S ribosomal protein L18-3 [Zea mays] | 0 |
| Q940B0 | Large ribosomal subunit protein eL18x OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VN85 | Ribosomal_L18e/L15P domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10564 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology