Basic Information
Locus ID:
nbis-gene-33109
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00044.1 | 1318259 | 1323700 | - | nbis-gene-33109 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 46,898.86 Da | 48.41 | 74.16 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 134 | 368 | 1.18171E-103 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 136 | 225 | 1.2E-7 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 240 | 369 | 8.5E-31 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 126 | 397 | 4.55E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 216 | 393 | 6.8E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 127 | 214 | 2.8E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 135 | 369 | 26.237663 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 141 | 167 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 82 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_039796955.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1-like [Panicum virgatum] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0W1X2 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG650500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology