Basic Information
Locus ID:
nbis-gene-33107
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
heat shock factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00044.1 | 1306111 | 1313330 | + | nbis-gene-33107 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 76,846.67 Da | 62.03 | 73.67 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 410 | 499 | 1.0E-30 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 407 | 499 | 1.72E-32 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 402 | 500 | 4.6E-36 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 406 | 499 | 2.5E-58 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 449 | 473 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 461 | 473 | 9.8E-19 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 448 | 460 | 9.8E-19 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 410 | 433 | 9.8E-19 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 694 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 694 | - | - |
| Coils | Coil | Coil | 572 | 592 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G46264.1 | heat shock transcription factor B4. Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions. | 0 |
| RefSeq | XP_025804091.1 | heat stress transcription factor B-4b-like [Panicum hallii] | 0 |
| Q7XHZ0 | Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7EZ90 | HSF_DOMAIN domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G450800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology