Basic Information
Locus ID:
nbis-gene-32968
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00044.1 | 800738 | 806957 | - | nbis-gene-32968 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 33,880.42 Da | 59.69 | 71.91 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 141 | 267 | 9.4E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 139 | 267 | 9.0E-30 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 133 | 276 | 9.7E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 140 | 315 | 20.35792 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 146 | 172 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_025802433.1 | CDPK-related kinase 5-like [Panicum hallii] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7EYQ2 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G435800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011937m.g.v1.0, Thhalv10023098m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0190_0010.v2.2 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G04062 |
| Poaceae | Zea mays | 2 | Zm00001eb085930_P001, Zm00001eb233750_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-32968, nbis-gene-57804 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107027768, gene-LOC114075599 |