Basic Information
Locus ID:
nbis-gene-3291
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00003.1 | 312872 | 318098 | - | nbis-gene-3291 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.79 | 79,222.55 Da | 54.20 | 82.34 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 349 | 555 | 4.7E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 286 | 555 | 4.86E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 355 | 575 | 2.9E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 350 | 5.2E-8 | - |
| SMART | SM00220 | serkin_6 | 302 | 554 | 7.6E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 302 | 560 | 20.160044 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 405 | 417 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 543 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 665 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 567 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53810.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_039852076.1 | probable L-type lectin-domain containing receptor kinase S.5 [Panicum virgatum] | 0 |
| Q9M345 | L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7DRE8 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G486200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 11 | AH02.577, AH03.569, BH02.583, BH03.679, BH09.49, CH01.303 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_5AG0407920, gene-QOZ80_5BG0456240 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0313620.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 9 | gene-QYE76_004315, gene-QYE76_053699, gene-QYE76_060580 ... |
| Poaceae | Oryza coarctata | 1 | Oco07G001020 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g06160.1, LOC_Os04g01860.1 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_05G055500, gene-BS78_06G012600, gene-BS78_K195600 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr25G016660 |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G489100, Tel5E01G776200 |
| Poaceae | Triticum dicoccoides | 8 | gene_TRIDC3AG067650, gene_TRIDC3BG071900 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS3B02G334100.1, TraesCS3D02G299500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb092630_P001 |
| Poaceae | Zoysia japonica | 11 | nbis-gene-3291, nbis-gene-37499, nbis-gene-37500 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g19235, Zma_g19238, Zma_g20806, Zma_g3637 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000034l.10 |