Basic Information
Locus ID:
nbis-gene-32699
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00043.1 | 2090708 | 2096168 | - | nbis-gene-32699 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 54,220.33 Da | 45.37 | 83.97 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 264 | 363 | 0.00109455 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 288 | 366 | 5.6E-13 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 370 | 410 | 1.7E-11 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 251 | 418 | 5.45E-23 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 250 | 289 | 7.2E-7 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 291 | 358 | 1.6E-21 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 359 | 475 | 2.8E-19 | - |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 340 | 359 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 431 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_004967436.1 | uncharacterized protein LOC101780417 [Setaria italica] | 0 |
| Q9P7J5 | Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9SVE4 | AAA domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_51540 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology