Basic Information
Locus ID:
nbis-gene-3267
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00003.1 | 188711 | 200661 | + | nbis-gene-3267 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 48,114.17 Da | 46.35 | 70.77 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 257 | 327 | 9.9E-18 | IPR025757 |
| SUPERFAMILY | SSF50729 | PH domain-like | 39 | 102 | 1.11E-5 | - |
| ProSiteProfiles | PS50003 | PH domain profile. | 1 | 96 | 7.376801 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 208 | - | - |
| Coils | Coil | Coil | 139 | 166 | - | - |
| Coils | Coil | Coil | 296 | 330 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.3 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | NP_001147804.1 | Rho GTPase-activating protein 7-like [Zea mays] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D6K3H7 | Rho GTPase activator OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d029212 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology