Basic Information
Locus ID:
nbis-gene-32632
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Amino acid permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00043.1 | 1806762 | 1816156 | - | nbis-gene-32632 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 167,833.45 Da | 40.25 | 92.59 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 1442 | 1491 | 1.7E-14 | IPR029485 |
| Pfam | PF04765 | Protein of unknown function (DUF616) | 439 | 734 | 1.3E-89 | IPR006852 |
| Pfam | PF04398 | Protein of unknown function, DUF538 | 110 | 222 | 8.7E-26 | IPR007493 |
| Pfam | PF13520 | Amino acid permease | 1004 | 1403 | 1.1E-43 | IPR002293 |
| SUPERFAMILY | SSF141562 | At5g01610-like | 82 | 228 | 1.7E-33 | IPR036758 |
| Gene3D | G3DSA:2.30.240.10 | - | 89 | 230 | 8.8E-28 | IPR036758 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 999 | 1427 | 4.7E-90 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G34960.1 | cationic amino acid transporter 5. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane. | 0 |
| RefSeq | XP_039845999.1 | cationic amino acid transporter 5-like [Panicum virgatum] | 0 |
| O64759 | Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UI15 | AA_permease_C domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_32558 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology