Basic Information
Locus ID:
nbis-gene-32367
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00043.1 | 686945 | 689882 | + | nbis-gene-32367 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 56,167.07 Da | 37.02 | 101.35 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 239 | 507 | 1.63508E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 32 | 90 | 1.0E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 235 | 434 | 7.4E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 210 | 504 | 2.43E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 122 | 3.74E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 139 | 1.1E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 194 | 308 | 5.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 309 | 508 | 5.6E-60 | - |
| SMART | SM00220 | serkin_6 | 233 | 507 | 2.5E-37 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 103 | 125 | 7.44243 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 233 | 510 | 38.110222 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 239 | 261 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 353 | 365 | - | IPR008271 |
| Coils | Coil | Coil | 497 | 510 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_039813655.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Panicum virgatum] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0RML6 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5NG154800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology