Basic Information
Locus ID:
nbis-gene-32046
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
TMV resistance protein N-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00042.1 | 392969 | 406294 | - | nbis-gene-32046 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 97,823.43 Da | 39.98 | 92.26 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 513 | 646 | 2.2777E-4 | - |
| Pfam | PF00069 | Protein kinase domain | 35 | 315 | 7.0E-53 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 336 | 415 | 6.1E-8 | IPR000535 |
| Pfam | PF00931 | NB-ARC domain | 511 | 755 | 7.6E-42 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 494 | 768 | 8.94E-55 | IPR027417 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 317 | 1.75E-71 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 325 | 455 | 9.42E-12 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 329 | 454 | 5.9E-15 | IPR013783 |
| Gene3D | G3DSA:1.10.10.10 | - | 748 | 851 | 1.2E-8 | IPR036388 |
| Gene3D | G3DSA:3.40.50.300 | - | 497 | 659 | 8.0E-30 | IPR027417 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 110 | 6.1E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 328 | 9.2E-50 | - |
| SMART | SM00220 | serkin_6 | 35 | 318 | 6.6E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 35 | 322 | 38.251564 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 321 | 450 | 10.472175 | IPR000535 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 41 | 63 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 171 | 183 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 701 | 715 | 9.6E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 604 | 618 | 9.6E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 533 | 548 | 9.6E-15 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_034569209.1 | uncharacterized protein LOC117833724 isoform X1 [Setaria viridis] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9USE9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_29302 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology