Basic Information
Locus ID:
nbis-gene-31882
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Wall-associated receptor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00041.1 | 1560011 | 1574578 | + | nbis-gene-31882 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 113,601.35 Da | 51.89 | 73.72 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 685 | 720 | 0.00201439 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 447 | 509 | 1.3E-12 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 127 | 187 | 1.7E-13 | IPR025287 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 673 | 723 | 1.1E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 730 | 788 | 6.5E-7 | - |
| SMART | SM00179 | egfca_6 | 685 | 728 | 0.0016 | IPR001881 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16260.3 | - | 0 |
| RefSeq | XP_034607146.1 | wall-associated receptor kinase 2-like isoform X1 [Setaria viridis] | 0 |
| Q9SA25 | Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana OX=3702 GN=WAKL8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9URJ0 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_29038 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0525960, gene-QOZ80_6AG0525980 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0525250.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G008760 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG078570 |
| Poaceae | Zoysia japonica | 5 | nbis-gene-31881, nbis-gene-31882, nbis-gene-50705 ... |
| Poaceae | Zoysia macrostachya | 3 | Zma_g29880, Zma_g32067, Zma_g32068 |