Basic Information
Locus ID:
nbis-gene-31881
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Epidermal growth factor-like domain.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00041.1 | 1557325 | 1559293 | + | nbis-gene-31881 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 41,460.23 Da | 47.44 | 76.61 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 205 | 238 | 9.81898E-4 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 273 | 335 | 2.4E-12 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 205 | 238 | 7.96E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 205 | 245 | 1.7E-7 | - |
| SMART | SM00179 | egfca_6 | 205 | 246 | 0.001 | IPR001881 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034607146.1 | wall-associated receptor kinase 2-like isoform X1 [Setaria viridis] | 0 |
| TrEMBL | A0A5J9URJ0 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_29038 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0525960, gene-QOZ80_6AG0525980 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0525250.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G008760 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG078570 |
| Poaceae | Zoysia japonica | 5 | nbis-gene-31881, nbis-gene-31882, nbis-gene-50705 ... |
| Poaceae | Zoysia macrostachya | 3 | Zma_g29880, Zma_g32067, Zma_g32068 |