Basic Information
Locus ID:
nbis-gene-3184
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00002.1 | 7831798 | 7840157 | - | nbis-gene-3184 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 65,995.46 Da | 44.22 | 75.38 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 468 | 583 | 1.0E-12 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 468 | 583 | 1.3E-20 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 137 | 180 | 2.13E-6 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 272 | 464 | 2.05E-24 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 32 | 91 | 5.1E-7 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 256 | 375 | 4.7E-7 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 458 | 590 | 7.8E-29 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 149 | 183 | 2.2E-5 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 49 | 90 | 8.643164 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 265 | 591 | 134.401123 | IPR030380 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 468 | 591 | 21.54355 | IPR001525 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 147 | 191 | 10.161281 | IPR015940 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 544 | 556 | - | IPR018117 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_004986027.1 | DNA (cytosine-5)-methyltransferase DRM2 [Setaria italica] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WK75 | DNA (Cytosine-5)-methyltransferase DRM2 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08289 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology