Basic Information
Locus ID:
nbis-gene-31439
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00040.1 | 1531417 | 1539438 | - | nbis-gene-31439 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 67,379.69 Da | 40.68 | 89.82 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 114 | 149 | 2.6E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 436 | 515 | 1.4E-10 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 208 | 2.04E-30 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 418 | 502 | 8.7E-19 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 409 | 505 | 1.1E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 109 | 221 | 5.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 108 | 1.7E-19 | IPR032675 |
| SMART | SM00219 | tyrkin_6 | 434 | 557 | 1.0E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 619 | 11.283893 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 440 | 462 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 619 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_022682574.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Setaria italica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | K3XE91 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101766119 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology