Basic Information
Locus ID:
nbis-gene-31421
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00040.1 | 1472325 | 1478116 | + | nbis-gene-31421 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 21,175.93 Da | 31.78 | 89.43 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 135 | 188 | 8.3E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 113 | 188 | 1.94E-16 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 84 | 1.28E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 101 | 1.4E-12 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 105 | 190 | 1.6E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 132 | 193 | 9.3334 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 138 | 160 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.3 | - | 0 |
| RefSeq | XP_045090944.1 | leucine-rich repeat receptor protein kinase HPCA1 [Aegilops tauschii subsp. strangulata] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VMD2 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_18543 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g009010 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g03510 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-31421 |