Basic Information
Locus ID:
nbis-gene-31274
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
divergent subfamily of APPLE domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00040.1 | 845768 | 846770 | + | nbis-gene-31274 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 15,370.65 Da | 40.20 | 84.71 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 4 | 132 | 2.4E-14 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 133 | 9.95E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 136 | 2.4E-33 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 138 | 13.305055 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65800.1 | receptor kinase 2. encodes a putative receptor-like serine/threonine protein kinases that is similar to brassica self-incompatibility (S) locus. expressed in specifically in cotyledons, leaves, and sepals, in correlation with the maturation of these structures. | 0 |
| RefSeq | XP_004970201.1 | receptor-like serine/threonine-protein kinase SD1-8 isoform X1 [Setaria italica] | 0 |
| Q9S972 | Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana OX=3702 GN=SD16 PE=1 SV=2 | 0 | |
| TrEMBL | A0A368RBZ6 | Receptor-like serine/threonine-protein kinase OS=Setaria italica OX=4555 GN=SETIT_5G342400v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1541 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g57540.1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-31274 |