Basic Information
Locus ID:
nbis-gene-31074
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00039.1 | 2530938 | 2534271 | - | nbis-gene-31074 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.43 | 10,479.09 Da | 57.39 | 102.75 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 71 | 5.99E-6 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 82 | 6.9E-8 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27290.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_002445187.1 | putative serine/threonine-protein kinase isoform X2 [Sorghum bicolor] | 0 |
| O81832 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 | 0 | |
| TrEMBL | C5YIE9 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3007G071100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0004010, CQ.Regalona.r1.8BG0004180 |
| Apiaceae | Apium graveolens | 2 | Ag10G01027, Ag4G01609 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-31074, nbis-gene-47989 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g30175 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.124 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-21773, nbisL1-mrna-21792, nbisL1-mrna-26110 ... |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4668 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4448 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-19434 |
| Salicaceae | Populus euphratica | 2 | populus_peu17329, populus_peu37223 |