Basic Information
Locus ID:
nbis-gene-30744
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
alanine aminotransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00039.1 | 999270 | 1007924 | - | nbis-gene-30744 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.92 | 100,597.38 Da | 60.48 | 71.14 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04570 | zinc-finger of the FCS-type, C2-C2 | 348 | 397 | 2.1E-21 | IPR007650 |
| SUPERFAMILY | SSF53383 | PLP-dependent transferases | 666 | 901 | 4.11E-21 | IPR015424 |
| Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 | 606 | 656 | 2.8E-13 | IPR015422 |
| Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 | 774 | 909 | 5.8E-47 | IPR015422 |
| Gene3D | G3DSA:1.10.287.1970 | - | 657 | 667 | 2.8E-13 | - |
| Gene3D | G3DSA:3.40.640.10 | - | 668 | 703 | 2.5E-7 | IPR015421 |
| ProSiteProfiles | PS51795 | Zinc finger FLZ-type profile. | 355 | 399 | 24.601782 | IPR007650 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 463 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko00220 (Arginine biosynthesis)
map00220 (Arginine biosynthesis)
ko00250 (Alanine, aspartate and glutamate metabolism)
map00250 (Alanine, aspartate and glutamate metabolism)
ko00710 (Carbon fixation by Calvin cycle)
map00710 (Carbon fixation by Calvin cycle)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01210 (2-Oxocarboxylic acid metabolism)
map01210 (2-Oxocarboxylic acid metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17290.1 | alanine aminotransferas. Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia | 0 |
| RefSeq | XP_025802687.1 | alanine aminotransferase 2-like isoform X2 [Panicum hallii] | 0 |
| F4I7I0 | Alanine aminotransferase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALAAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7ESK2 | alanine transaminase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G264900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology