Basic Information
Locus ID:
nbis-gene-30695
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00039.1 | 820532 | 821146 | + | nbis-gene-30695 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 22,278.05 Da | 72.61 | 77.06 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 116 | 184 | 1.01E-7 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 107 | 198 | 2.1E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 135 | 204 | 8.612566 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 87 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26290.1 | root-specific kinase 1. | 0 |
| RefSeq | XP_004956941.1 | serine/threonine-protein kinase RIPK [Setaria italica] | 0 |
| O64842 | Probable serine/threonine-protein kinase PBL12 OS=Arabidopsis thaliana OX=3702 GN=PBL12 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5WHN8 | Serine/threonine-protein kinase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002064 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g25850 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G16414 |
| Poaceae | Oryza coarctata | 1 | Oco12G004670 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG020320 |
| Poaceae | Zea mays | 1 | Zm00001eb256760_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-30695, nbis-gene-40007, nbis-gene-57212 ... |
| Zosteraceae | Zostera marina | 1 | Zosma01g31040.v3.1 |