Basic Information
Locus ID:
nbis-gene-30499
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00039.1 | 825 | 3106 | - | nbis-gene-30499 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 47,084.48 Da | 33.51 | 91.26 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 278 | 432 | 3.05318E-74 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 81 | 253 | 6.72094E-60 | - |
| Pfam | PF00190 | Cupin | 84 | 235 | 6.5E-25 | IPR006045 |
| Pfam | PF00190 | Cupin | 276 | 418 | 1.5E-20 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 64 | 422 | 8.47E-47 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 69 | 271 | 1.4E-30 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 275 | 438 | 7.5E-48 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 275 | 419 | 6.4E-14 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 80 | 237 | 2.3E-30 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 356 | 371 | 2.7E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 338 | 354 | 2.7E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 291 | 311 | 2.7E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 396 | 413 | 2.7E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 374 | 392 | 2.7E-13 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_037442349.1 | 11S globulin seed storage protein 2-like [Triticum dicoccoides] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TF64 | 11S seed storage protein OS=Eragrostis curvula OX=38414 GN=EJB05_43444 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology