Basic Information
Locus ID:
nbis-gene-30476
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00038.1 | 2435072 | 2440435 | + | nbis-gene-30476 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 96,438.60 Da | 49.28 | 74.00 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 81 | 176 | 3.20244E-43 | - |
| Pfam | PF00564 | PB1 domain | 97 | 177 | 3.0E-15 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 782 | 849 | 3.3E-9 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 93 | 178 | 2.42E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 793 | 860 | 9.95E-12 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 867 | 1.2E-12 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 98 | 179 | 3.7E-12 | - |
| SMART | SM00666 | PB1_new | 92 | 179 | 9.2E-24 | IPR000270 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_002442438.2 | uncharacterized protein LOC8069730 isoform X1 [Sorghum bicolor] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SJC9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_55575 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology