Basic Information
Locus ID:
nbis-gene-30461
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00038.1 | 2351085 | 2354124 | - | nbis-gene-30461 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 27,856.47 Da | 43.77 | 72.28 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 89 | 168 | 1.1E-20 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 175 | 247 | 1.5E-26 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 93 | 249 | 4.58E-48 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 174 | 258 | 1.2E-30 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 72 | 173 | 8.6E-24 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 46 | 258 | 3.6E-23 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 175 | 259 | 26.965128 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 56 | 169 | 16.270973 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 38 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_034585169.1 | kinesin-like protein KIN-12F isoform X2 [Setaria viridis] | 0 |
| B9GE13 | Kinesin-like protein KIN-12F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12F PE=3 SV=1 | 0 | |
| TrEMBL | A0A4U6VIG1 | Kinesin motor domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G388200v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology