Basic Information
Locus ID:
nbis-gene-30442
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00038.1 | 2266597 | 2270862 | - | nbis-gene-30442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 59,253.07 Da | 45.10 | 90.09 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 2 | 105 | 4.61979E-47 | - |
| Pfam | PF03000 | NPH3 family | 192 | 341 | 5.6E-41 | IPR027356 |
| Pfam | PF03000 | NPH3 family | 360 | 387 | 3.2E-7 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 9 | 97 | 8.5E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 4 | 98 | 1.33E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 101 | 7.2E-13 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 192 | 411 | 34.936878 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 10 | 78 | 11.10928 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 545 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 476 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67440.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_004963018.1 | BTB/POZ domain-containing protein NPY4 [Setaria italica] | 0 |
| Q9FN09 | Phototropic-responsive NPH3 family protein NPY3 OS=Arabidopsis thaliana OX=3702 GN=NPY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WQ57 | BTB/POZ domain-containing protein NPY4 OS=Eragrostis curvula OX=38414 GN=EJB05_00734 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology