Basic Information
Locus ID:
nbis-gene-30177
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00038.1 | 626643 | 631717 | + | nbis-gene-30177 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 40,430.20 Da | 62.35 | 47.63 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 236 | 256 | 2.0E-6 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 279 | 333 | 1.5E-22 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 234 | 256 | 4.84E-8 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 276 | 335 | 2.35E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 262 | 336 | 3.1E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 226 | 260 | 3.1E-9 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 270 | 334 | 1.8E-33 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 235 | 268 | 1.3E-4 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 236 | 256 | 11.003447 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 270 | 335 | 32.730164 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 71 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | NP_001130833.1 | Probable WRKY transcription factor 3 [Zea mays] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9WPJ8 | EcWRKY-19 OS=Eragrostis curvula OX=38414 GN=EJB05_01428 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology