Basic Information
Locus ID:
nbis-gene-29790
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00037.1 | 1408126 | 1411791 | + | nbis-gene-29790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 43,782.64 Da | 38.72 | 76.11 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 6 | 138 | 2.7E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 148 | 2.39E-37 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 81 | 5.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 82 | 158 | 5.4E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 6 | 297 | 20.103508 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 12 | 35 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 231 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_002454092.1 | serine/threonine-protein kinase Nek6 [Sorghum bicolor] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9V0P5 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_21041 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology