Basic Information
Locus ID:
nbis-gene-29722
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
AGC2-1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00037.1 | 1169902 | 1171323 | + | nbis-gene-29722 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 50,963.54 Da | 58.29 | 82.71 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 66 | 234 | 2.0E-22 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 307 | 404 | 3.4E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 424 | 1.46E-64 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 62 | 165 | 9.9E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 232 | 9.9E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 305 | 423 | 3.2E-35 | - |
| SMART | SM00220 | serkin_6 | 63 | 404 | 2.8E-68 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 404 | 40.244457 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 405 | 473 | 10.000443 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 204 | 216 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 303 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13000.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_004953017.1 | serine/threonine-protein kinase OXI1 [Setaria italica] | 0 |
| Q9LSF1 | Serine/threonine-protein kinase OXI1 OS=Arabidopsis thaliana OX=3702 GN=OXI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5VA15 | Serine/threonine-protein kinase OXI1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016989 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg36076, jg37740, jg8078 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_6515 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah028393 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g062740 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg26636, Sbi_jg33926 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg15152 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011839 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73942, Sgl77449 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000004855, gene:ENSEOMG00000038128 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0009340, CQ.Regalona.r1.9BG0009570 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30013820 |
| Apiaceae | Apium graveolens | 2 | Ag11G03078, Ag9G01629 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G012880, scaffold008808G000060 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103708546, gene-LOC103717538 |
| Asteraceae | Flaveria trinervia | 4 | Ftri10G09260, Ftri15G21140, Ftri3G14544, Ftri9G03192 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G25250.1, AT4G13000.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10002544m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g22900.v2.2, Sp7g10060.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB01g034800.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1532 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1562 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno08g04860 |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate01g15310, gene.Thate01g25840, gene.Thate05g10830 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-6411 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.1440 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00036567 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G23899, Lb5G28745 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.1378, BH09.1559, CH09.1679 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2BG0192000, gene-QOZ80_4AG0312830 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0177320.1 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_023516, gene-QYE76_023517, gene-QYE76_037622 |
| Poaceae | Oryza coarctata | 4 | Oco03G014610, Oco04G015090, Oco07G009230, Oco08G009100 |
| Poaceae | Oryza sativa | 3 | LOC_Os02g39090.1, LOC_Os04g41160.1, LOC_Os12g09630.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G187900, gene-BS78_06G141600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0307185 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr06G007900, Chr15G009570, Chr23G010120, Chr25G009510 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G604500, Tel6E01G419500 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG050220, gene_TRIDC2BG053480 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G347400.1, TraesCS2B02G365900.1 ... |
| Poaceae | Zea mays | 5 | Zm00001eb079000_P001, Zm00001eb187940_P001 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-29722, nbis-gene-36935, nbis-gene-7343 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g13840, Zma_g19950, Zma_g21501 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG03.1030, evm.TU.LG18.701, evm.TU.LG26.326 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g15150 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_5_RagTag.1728, evm.TU.Scaffold_9_RagTag.1514 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-12221, nbisL1-mrna-20687, nbisL1-mrna-20803 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-12156, nbisL1-mrna-6006 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-10798, nbisL1-mrna-21502 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000003l.955, evm.TU.utg000006l.1001 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00009308, Maker00013570 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-10536, nbisL1-mrna-13939 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-15657, nbisL1-mrna-4573 |
| Salicaceae | Populus euphratica | 1 | populus_peu30855 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132609835 |
| Solanaceae | Solanum chilense | 1 | SOLCI006976100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107030613 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_16512 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G2551 |
| Zosteraceae | Zostera marina | 2 | Zosma04g17560.v3.1, Zosma05g07070.v3.1 |