Basic Information
Locus ID:
nbis-gene-29011
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
JAB1/Mov34/MPN/PAD-1 ubiquitin protease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00036.1 | 3478 | 8941 | - | nbis-gene-29011 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 6,714.77 Da | 74.98 | 99.18 | 0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039851648.1 | AMSH-like ubiquitin thioesterase 2 isoform X2 [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0SJG3 | AMSH-like ubiquitin thioesterase 2 OS=Panicum virgatum OX=38727 GN=PVAP13_5KG423900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 7 | Sbi_jg10794, Sbi_jg16797, Sbi_jg20202, Sbi_jg22537 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2426.V1.1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-29011, nbis-gene-51055 |