HalophFGD

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Basic Information
Locus ID: nbis-gene-28886
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00035.1 1635564 1640613 + nbis-gene-28886
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.05 19,027.85 Da 62.70 84.09 0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 33 47 - -
MobiDBLite mobidb-lite consensus disorder prediction 12 47 - -
Best hit
Source Best Hit ID Description E-value
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 13 AH03.1396, AH09.716, BH03.1526, BH06.774, BH07.1441 ...
BH07.1450, CH01.2203, CH03.1681, CH05.1622, CH05.609, CH07.1155, CH07.1167, Contig398.8
Poaceae Eleusine coracana subsp. coracana 8 gene-QOZ80_2AG0111430, gene-QOZ80_2AG0127550 ...
gene-QOZ80_2BG0164900, gene-QOZ80_2BG0182980, gene-QOZ80_2BG0182990, gene-QOZ80_3AG0224030, gene-QOZ80_6AG0528540, gene-QOZ80_6BG0482550
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.1HG0022550.1.CDS1 ...
HORVU.MOREX.r3.1HG0022560.1.CDS1
Poaceae Lolium multiflorum 2 gene-QYE76_041293, gene-QYE76_041296
Poaceae Oryza coarctata 6 Oco19G000410, Oco19G000940, Oco20G000410, Oco20G001080 ...
Oco20G001090, Oco23G003500
Poaceae Oryza sativa 10 LOC_Os02g29080.1, LOC_Os10g03260.1, LOC_Os10g03480.1 ...
LOC_Os10g03490.1, LOC_Os10g06510.1, LOC_Os10g06560.1, LOC_Os10g06580.1, LOC_Os10g06780.1, LOC_Os10g06800.1, LOC_Os10g06950.1
Poaceae Paspalum vaginatum 5 gene-BS78_01G156100, gene-BS78_01G160500 ...
gene-BS78_01G160800, gene-BS78_01G208800, gene-BS78_01G226200
Poaceae Puccinellia tenuiflora 1 Pt_Chr0304102
Poaceae Sporobolus alterniflorus 7 Chr06G026670, Chr06G030670, Chr09G001390, Chr09G010780 ...
Chr0G026140, Chr13G014400, Chr15G015390
Poaceae Thinopyrum elongatum 5 Tel1E01G188700, Tel1E01G188900, Tel1E01G189200 ...
Tel1E01G189300, Tel5E01G115800
Poaceae Triticum dicoccoides 9 gene_TRIDC1AG017320, gene_TRIDC1AG017330 ...
gene_TRIDC1AG017360, gene_TRIDC1BG017320, gene_TRIDC1BG017330, gene_TRIDC1BG017370, gene_TRIDC3BG049810, gene_TRIDC5AG008040, gene_TRIDC5BG010530
Poaceae Triticum aestivum 18 TraesCS1A02G091900.1.cds1, TraesCS1A02G092000.1.cds1 ...
TraesCS1A02G092300.1.cds1, TraesCS1A02G092500.1.cds1, TraesCS1B02G119600.1.cds1, TraesCS1B02G119700.1.cds1, TraesCS1B02G119800.1, TraesCS1B02G120100.1.cds1, TraesCS1D02G100300.1.cds1, TraesCS1D02G100600.1, TraesCS1D02G100900.1.cds1, TraesCS1D02G101100.1.cds1, TraesCS4D02G294500.1.cds1, TraesCS5A02G052500.1.cds1, TraesCS5B02G064200.1.cds1, TraesCS5B02G064300.1.cds1, TraesCS5D02G063900.1.cds1, TraesCS6D02G134400.1
Poaceae Zea mays 4 Zm00001eb276610_P001, Zm00001eb374310_P001 ...
Zm00001eb374320_P001, Zm00001eb424270_P001
Poaceae Zoysia japonica 7 nbis-gene-12342, nbis-gene-12388, nbis-gene-21194 ...
nbis-gene-21394, nbis-gene-28886, nbis-gene-51494, nbis-gene-53102
Poaceae Zoysia macrostachya 8 Zma_g10497, Zma_g13371, Zma_g17639, Zma_g17640, Zma_g24852 ...
Zma_g25665, Zma_g25687, Zma_g8018
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.