Basic Information
Locus ID:
nbis-gene-28361
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00034.1 | 1278247 | 1280941 | + | nbis-gene-28361 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 55,032.17 Da | 71.39 | 52.91 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 483 | 511 | 1.31431E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 482 | 511 | 1.91E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 462 | 511 | 7.4E-7 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 301 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | NP_001168025.1 | putative RING zinc finger domain superfamily protein [Zea mays] | 0 |
| TrEMBL | A0A811P5V8 | RING-type domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS23593 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology