Basic Information
Locus ID:
nbis-gene-28051
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00034.1 | 69123 | 70644 | + | nbis-gene-28051 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.01 | 8,374.55 Da | 18.34 | 81.28 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 68 | 2.95E-12 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 13 | 76 | 5.9E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 78 | 10.690265 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 53 | 65 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07570.4 | - | 0 |
| RefSeq | XP_003567536.1 | receptor-like cytoplasmic kinase 176 [Brachypodium distachyon] | 0 |
| Q65XV8 | Receptor-like cytoplasmic kinase 176 OS=Oryza sativa subsp. japonica OX=39947 GN=RLCK176 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6TJC3 | Putative serine/threonine-protein kinase NAK OS=Panicum miliaceum OX=4540 GN=C2845_PM01G24530 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 2 | Sgl04520, Sgl09565 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30002050, pistato.v30260720 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G2427 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G763200 |
| Poaceae | Zea mays | 1 | Zm00001eb425040_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-28051 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG19.868 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012319 |
| Salicaceae | Populus euphratica | 1 | populus_peu09279 |