Basic Information
Locus ID:
nbis-gene-28033
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00033.1 | 2701698 | 2708021 | + | nbis-gene-28033 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 60,741.74 Da | 54.71 | 84.46 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 92 | 219 | 2.62206E-23 | IPR002083 |
| CDD | cd00121 | MATH | 342 | 450 | 8.36552E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 470 | 536 | 3.5E-14 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 90 | 224 | 3.6E-29 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 336 | 453 | 1.14E-10 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 458 | 537 | 3.24E-20 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 89 | 222 | 1.6E-23 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 452 | 545 | 3.2E-21 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 333 | 451 | 1.9E-6 | IPR008974 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 479 | 536 | 15.680001 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 90 | 219 | 16.325392 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025791225.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | B8BGZ0 | Speckle-type POZ protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_33690 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Zoysia japonica | 1 | nbis-gene-28033 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13279 |