halophFGD

Basic Information

Locus ID: nbis-gene-27898

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00033.1	1800217	1800847	-	nbis-gene-27898

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.74	11,391.87 Da	41.01	83.30	-0.48

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021321327.1	uncharacterized protein LOC110437267 [Sorghum bicolor]	0
TrEMBL	A0A0A9C8Z7	CCHC-type domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	2	gene_12571, gene_15568
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg55472, Sbi_jg8972
Arecaceae	Phoenix dactylifera	1	gene-LOC120107363
Asteraceae	Flaveria trinervia	4	Ftri10G03390, Ftri12G31698, Ftri2G11694, FtriNA14812
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate09g09880
Plumbaginaceae	Limonium bicolor	3	Lb1G00264, Lb3G20497, Lb4G25704
Poaceae	Echinochloa crus-galli	4	AH03.1315, CH03.1969, CH05.577, CH08.1150
Poaceae	Eleusine coracana subsp. coracana	35	gene-QOZ80_1AG0019390, gene-QOZ80_1BG0066180 ... gene-QOZ80_1BG0067080, gene-QOZ80_1BG0067700, gene-QOZ80_1BG0069300, gene-QOZ80_1BG0074530, gene-QOZ80_1BG0074640, gene-QOZ80_2AG0123690, gene-QOZ80_2BG0178930, gene-QOZ80_2BG0179290, gene-QOZ80_3BG0274590, gene-QOZ80_4AG0322600, gene-QOZ80_4AG0323530, gene-QOZ80_4AG0323950, gene-QOZ80_4BG0346930, gene-QOZ80_6AG0521910, gene-QOZ80_6AG0522850, gene-QOZ80_6BG0469260, gene-QOZ80_7AG0562030, gene-QOZ80_7AG0565250, gene-QOZ80_7AG0565790, gene-QOZ80_7BG0597510, gene-QOZ80_9AG0679840, gene-QOZ80_9AG0680620, gene-QOZ80_9AG0681730, gene-QOZ80_9AG0681740, gene-QOZ80_9BG0703180, gene-QOZ80_9BG0703330, gene-QOZ80_9BG0705840, gene-QOZ80_9BG0705990, gene-QOZ80_UnG0719230, gene-QOZ80_UnG0719250, gene-QOZ80_UnG0722140, gene-QOZ80_UnG0722970, gene-QOZ80_UnG0725070
Poaceae	Oryza sativa	2	ChrUn.fgenesh.mRNA.3, LOC_Os10g04210.1
Poaceae	Paspalum vaginatum	16	gene-BS78_01G262700, gene-BS78_02G095400, gene-BS78_K070500 ... gene-BS78_02G095500, gene-BS78_02G096200, gene-BS78_02G096600, gene-BS78_02G138900, gene-BS78_04G125400, gene-BS78_04G130800, gene-BS78_05G126800, gene-BS78_06G050000, gene-BS78_06G056600, gene-BS78_08G041200, gene-BS78_09G091400, gene-BS78_K179500, gene-BS78_K270700
Poaceae	Sporobolus alterniflorus	8	Chr01G020320, Chr09G007960, Chr10G004130, Chr20G010620 ... Chr25G012420, Chr27G000820, Chr27G001310, Chr27G001320
Poaceae	Zoysia japonica	11	nbis-gene-1312, nbis-gene-27882, nbis-gene-27898 ... nbis-gene-33840, nbis-gene-33894, nbis-gene-46925, nbis-gene-46926, nbis-gene-46927, nbis-gene-46928, nbis-gene-54284, nbis-gene-54872
Portulacaceae	Portulaca oleracea	10	evm.TU.LG03.1598, evm.TU.LG09.83, evm.TU.LG12.179 ... evm.TU.LG12.279, evm.TU.LG13.1372, evm.TU.LG17.1036, evm.TU.LG20.1444, evm.TU.LG21.1154, evm.TU.LG21.524, evm.TU.LG21.880
Solanaceae	Lycium barbarum	13	gene-LOC132607653, gene-LOC132607841, gene-LOC132607949 ... gene-LOC132609991, gene-LOC132610532, gene-LOC132611934, gene-LOC132612136, gene-LOC132612197, gene-LOC132612778, gene-LOC132613012, gene-LOC132613198, gene-LOC132613984, gene-LOC132637633