Basic Information
Locus ID:
nbis-gene-27803
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00033.1 | 1095304 | 1101363 | - | nbis-gene-27803 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 52,674.12 Da | 45.52 | 83.00 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 125 | 184 | 1.1E-12 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 73 | 1.3E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 372 | 424 | 1.85E-9 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 221 | 3.4E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 358 | 445 | 1.2E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 242 | 4.7E-42 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 98 | 124 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 171 | 193 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 170 | 12.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 173 | 195 | 7.688853 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 391 | 484 | 8.810442 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 397 | 420 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 484 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_004983096.1 | protein STRUBBELIG-RECEPTOR FAMILY 6 [Setaria italica] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V4Q9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_22548 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology