Basic Information
Locus ID:
nbis-gene-27470
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00032.1 | 411046 | 414220 | + | nbis-gene-27470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 10,407.94 Da | 36.04 | 72.25 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 61 | 4.5E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 61 | 1.63E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 5 | 63 | 2.0E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 89 | 12.570086 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03920.2 | - | 0 |
| RefSeq | XP_027071494.1 | serine/threonine-protein kinase tricorner-like [Coffea arabica] | 0 |
| P31034 | Serine/threonine-protein kinase CBK1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=CBK1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A453JPZ2 | AGC-kinase C-terminal domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2901.V1.1, AsparagusV1_Unassigned.80.V1.1 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1263 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1587 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-27470 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g00640, gene.Posoc01g35000 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.538 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00007975 |
| Salicaceae | Populus euphratica | 1 | populus_peu21550 |