Basic Information
Locus ID:
nbis-gene-27445
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00032.1 | 194541 | 199712 | + | nbis-gene-27445 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 60,522.01 Da | 45.15 | 82.09 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 127 | 186 | 5.3E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 75 | 6.5E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 405 | 445 | 2.14E-5 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 247 | 9.52E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 465 | 1.1E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 264 | 2.1E-49 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 149 | 172 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 126 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 196 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 219 | 22.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 151 | 173 | 7.226811 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 199 | 221 | 8.096991 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 291 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.2 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_004983096.1 | protein STRUBBELIG-RECEPTOR FAMILY 6 [Setaria italica] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SEY1 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_56887 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology