Basic Information
Locus ID:
nbis-gene-27444
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00032.1 | 180505 | 184257 | - | nbis-gene-27444 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 35,924.51 Da | 52.73 | 93.24 | 0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 205 | 335 | 9.6E-11 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 201 | 334 | 2.22E-17 | IPR036259 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 86 | 165 | 4.97E-12 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 98 | 169 | 1.2E-12 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 193 | 336 | 7.3E-24 | IPR036259 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 195 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_039830577.1 | organic cation/carnitine transporter 7-like [Panicum virgatum] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6S7K8 | Organic cation/carnitine transporter 7-like OS=Panicum miliaceum OX=4540 GN=C2845_PM02G15870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology