Basic Information
Locus ID:
nbis-gene-27137
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
LACS9
Description:
AMP-binding enzyme
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00031.1 | 944128 | 951359 | + | nbis-gene-27137 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 82,150.02 Da | 51.52 | 93.73 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00501 | AMP-binding enzyme | 266 | 320 | 1.3E-7 | IPR000873 |
| SUPERFAMILY | SSF56801 | Acetyl-CoA synthetase-like | 226 | 358 | 6.54E-12 | - |
| SUPERFAMILY | SSF56801 | Acetyl-CoA synthetase-like | 361 | 481 | 6.54E-7 | - |
| Gene3D | G3DSA:3.40.50.12780 | - | 316 | 375 | 3.5E-6 | IPR042099 |
KEGG Pathway
Pathway:
ko00061 (Fatty acid biosynthesis)
map00061 (Fatty acid biosynthesis)
ko00071 (Fatty acid degradation)
map00071 (Fatty acid degradation)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01212 (Fatty acid metabolism)
map01212 (Fatty acid metabolism)
ko02024 (Quorum sensing)
map02024 (Quorum sensing)
ko03320 (PPAR signaling pathway)
map03320 (PPAR signaling pathway)
ko04146 (Peroxisome)
map04146 (Peroxisome)
map04216 (Ferroptosis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77590.1 | long chain acyl-CoA synthetase 9. Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids. | 0 |
| RefSeq | XP_015616864.1 | long chain acyl-CoA synthetase 9, chloroplastic [Oryza sativa Japonica Group] | 0 |
| Q9CAP8 | Long chain acyl-CoA synthetase 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LACS9 PE=1 SV=1 | 0 | |
| TrEMBL | Q53JH3 | 4-coumarate--CoA ligase OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g06880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology