Basic Information
Locus ID:
nbis-gene-26977
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00031.1 | 228898 | 231695 | - | nbis-gene-26977 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 18,864.48 Da | 19.65 | 88.74 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 61 | 4.6E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 162 | 5.84E-32 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 79 | 3.6E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 86 | 166 | 6.4E-17 | - |
| SMART | SM00220 | serkin_6 | 4 | 159 | 3.4E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 167 | 9.658483 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38620.2 | cyclin-dependent kinase B1;2. Encodes a member of a plant specific family of cyclin dependent kinases. | 0 |
| RefSeq | XP_025804939.1 | cyclin-dependent kinase B1-1-like [Panicum hallii] | 0 |
| Q8L4P8 | Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB1-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UTS0 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_29839 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_673 |
| Apiaceae | Apium graveolens | 4 | Ag10G00605, Ag8G01440, AgUnG01548, AgUnG01549 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr07G017330 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-26977 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-9184 |